Tong, WeiDa: search on Z-Library

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1

A novel procedure on next generation sequencing data analysis using text mining algorithm

Zhao, Weizhong, Chen, James J., Perkins, Roger, Wang, Yuping, Liu, Zhichao, Hong, Huixiao, Tong, Weida, Zou, Wen

Journal:

BMC Bioinformatics

Year:

2016

Language:

english

File:

PDF, 2.33 MB

english, 2016

2

Bi2O2Se/Au-based Schottky Phototransistor with Fast Response and Ultrahigh Responsivity

Tong, Tong, Li, Weisheng, Qin, Shuchao, Yuan, Xiao, Chen, Yunfeng, Zhang, Chunchen, Liu, Wenqing, Wang, Peng, Hu, Weida, Wang, Fengqiu, Zhang, Junran, Zhang, Rong, Xu, Yongbing

Journal:

IEEE Electron Device Letters

Year:

2020

File:

PDF, 624 KB

2020

3

A deep learning model to recognize food contaminating beetle species based on elytra fragments

Wu, Leihong, Liu, Zhichao, Bera, Tanmay, Ding, Hongjian, Langley, Darryl A., Jenkins-Barnes, Amy, Furlanello, Cesare, Maggio, Valerio, Tong, Weida, Xu, Joshua

Journal:

Computers and Electronics in Agriculture

Year:

2019

Language:

english

File:

PDF, 1.96 MB

english, 2019

4

DILIrank: the largest reference drug list ranked by the risk for developing drug-induced liver injury in humans

Chen, Minjun, Suzuki, Ayako, Thakkar, Shraddha, Yu, Ke, Hu, ChuChu, Tong, Weida

Journal:

Drug Discovery Today

Year:

2016

Language:

english

File:

PDF, 187 KB

english, 2016

5

Enthalpies of sublimation and formation of polycyclic aromatic hydrocarbons (PAHs) derived from comparative molecular field analysis (CoMFA): Application of moment of inertia for molecular alignment

William J. Welsh, Weida Tong, Elizabeth R. Collantes, James S. Chickos, Sergei G. Gagarin

Journal:

Thermochimica Acta

Year:

1997

Language:

english

File:

PDF, 667 KB

english, 1997

6

Potential Reuse of Oncology Drugs in the Treatment of Rare Diseases

Liu, Zhichao, Fang, Hong, Slikker, William, Tong, Weida

Journal:

Trends in Pharmacological Sciences

Year:

2016

Language:

english

File:

PDF, 2.43 MB

english, 2016

7

Linking Pharmacogenomic Information on Drug Safety and Efficacy with Ethnic Minority Populations

Li, Dan, Xie, April Hui, Liu, Zhichao, Li, Dongying, Ning, Baitang, Thakkar, Shraddha, Tong, Weida, Xu, Joshua

Journal:

Year:

2020

File:

PDF, 1.49 MB

2020

8

Chemical characteristics of PM1/PM2.5 and influence on visual range at the summit of Mount Tai, North China

Zhao, Tong, Yang, Lingxiao, Yan, Weida, Zhang, Junmei, Lu, Wei, Yang, Yumeng, Chen, Jianmin, Wang, Wenxing

Journal:

Science of The Total Environment

Year:

2017

Language:

english

File:

PDF, 1.67 MB

english, 2017

9

Application of dynamic topic models to toxicogenomics data

Mikyung Lee,Zhichao Liu,Ruili Huang,Weida Tong

Journal:

BMC Bioinformatics

Year:

2016

Language:

english

File:

PDF, 2.31 MB

english, 2016

10

Drugp-Induced Rhabdomyolysis Atlas (DIRA) for idiosyncratic adverse drug reaction management

Wen, Zhining, Liang, Yu, Hao, Yingyi, Delavan, Brian, Huang, Ruili, Mikailov, Mike, Tong, Weida, Li, Menglong, Liu, Zhichao

Journal:

Drug Discovery Today

Year:

2018

Language:

english

File:

PDF, 743 KB

english, 2018

11

Structure−Activity Relationships for a Large Diverse Set of Natural, Synthetic, and Environmental Estrogens

Fang, Hong, Tong, Weida, Shi, Leming M., Blair, Robert, Perkins, Roger, Branham, William, Hass, Bruce S., Xie, Qian, Dial, Stacy L., Moland, Carrie L., Sheehan, Daniel M.

Journal:

Chemical Research in Toxicology

Year:

2001

Language:

english

File:

PDF, 410 KB

english, 2001

12

Quantitative structure-activity relationship methods: Perspectives on drug discovery and toxicology

Roger Perkins, Hong Fang, Weida Tong, William J. Welsh

Journal:

Environmental Toxicology and Chemistry

Year:

2003

Language:

english

File:

PDF, 135 KB

english, 2003

13

Study of serious adverse drug reactions using FDA-approved drug labeling and MedDRA

Wu, Leihong, Ingle, Taylor, Liu, Zhichao, Zhao-Wong, Anna, Harris, Stephen, Thakkar, Shraddha, Zhou, Guangxu, Yang, Junshuang, Xu, Joshua, Mehta, Darshan, Ge, Weigong, Tong, Weida, Fang, Hong

Journal:

BMC Bioinformatics

Year:

2019

Language:

english

File:

PDF, 1.79 MB

english, 2019

14

The landscape of hepatobiliary adverse reactions across 53 herbal and dietary supplements reveals immune-mediated injury as a common cause of hepatitis

Zhu, Jieqiang, Chen, Minjun, Borlak, Jürgen, Tong, Weida

Journal:

Archives of Toxicology

Year:

2019

Language:

english

File:

PDF, 3.99 MB

english, 2019

15

Study of 202 Natural, Synthetic, and Environmental Chemicals for Binding to the Androgen Receptor

Fang, Hong, Tong, Weida, Branham, William S., Moland, Carrie L., Dial, Stacy L., Hong, Huixiao, Xie, Qian, Perkins, Roger, Owens, William, Sheehan, Daniel M.

Journal:

Chemical Research in Toxicology

Year:

2003

Language:

english

File:

PDF, 497 KB

english, 2003

16

Structures of androgen receptor bound with ligands: advancing understanding of biological functions and drug discovery

Sakkiah, Sugunadevi, Ng, Hui Wen, Tong, Weida, Hong, Huixiao

Journal:

Expert Opinion on Therapeutic Targets

Year:

2016

Language:

english

File:

PDF, 1.84 MB

english, 2016

17

Structure-activity relationship approaches and applications

Weida Tong, William J. Welsh, Leming Shi, Hong Fang, Roger Perkins

Journal:

Environmental Toxicology and Chemistry

Year:

2003

Language:

english

File:

PDF, 299 KB

english, 2003

18

Toxicogenomics: A 2020 Vision

Liu, Zhichao, Huang, Ruili, Roberts, Ruth, Tong, Weida

Journal:

Trends in Pharmacological Sciences

Year:

2018

Language:

english

File:

PDF, 1.79 MB

english, 2018

19

DLI-IT: a deep learning approach to drug label identification through image and text embedding

Liu, Xiangwen, Meehan, Joe, Tong, Weida, Wu, Leihong, Xu, Xiaowei, Xu, Joshua

Journal:

BMC Medical Informatics and Decision Making

Year:

2020

File:

PDF, 1.08 MB

2020

20

Photooxidation of substituted benzyl alcohol by riboflavin

Weida Tong, Hongping Ye, Henghu Zhu, Valerian T. D'Souza

Journal:

Journal of Molecular Structure: THEOCHEM

Year:

1995

Language:

english

File:

PDF, 632 KB

english, 1995

21

Predicted changes in pre-mRNA secondary structure vary in their association with exon skipping for mutations in exons 2, 4, and 8 of the Hprt gene and exon 51 of the fibrillin gene

Meihua Tu, Weida Tong, Roger Perkins, Carrie R Valentine

Journal:

Mutation Research/Mutation Research Genomics

Year:

2000

Language:

english

File:

PDF, 269 KB

english, 2000

22

Self-Inclusion Complexes Derived from Cyclodextrins: Synthesis and Characterization of 6 A ,6 B -Bis- O -[ p -(allyloxy)phenyl]-Substituted β-Cyclodextrins

Chen, Zhen, Bradshaw, Jerald S., Yi, Guoliang, Pyo, Dongjin, Black, Delbert R., Zimmerman, S. Scott, Lee, Milton L., Tong, Weida, D'Souza, Valerian T.

Journal:

Journal of Organic Chemistry

Year:

1996

Language:

english

File:

PDF, 179 KB

english, 1996

23

Flavocyclodextrins as artificial redox enzymes. Part 4. Catalytic reactions of alcohols, aldehydes and thiols

Ye, Hongping, Tong, Weida, D'Souza, Valerian T.

Journal:

Journal of the Chemical Society Perkin Transactions 2

Year:

1994

Language:

english

File:

PDF, 872 KB

english, 1994

24

Efficient catalysis of a redox reaction by an artificial enzyme

Ye, Hongping, Tong, Weida, D'Souza, Valerian T.

Journal:

Journal of the American Chemical Society

Year:

1992

Language:

english

File:

PDF, 398 KB

english, 1992

25

Artificial redox enzymes. Part 3. Structure and properties

Ye, Hongping, Rong, Ding, Tong, Weida, D'Souza, Valerian T.

Journal:

Journal of the Chemical Society Perkin Transactions 2

Year:

1992

Language:

english

File:

PDF, 909 KB

english, 1992

26

Identification of New SRF Binding Sites in Genes Modulated by SRF Over-Expression in Mouse Hearts

Wei,, Jeanne, Xiaomin Zhang,, Gohar Azhar,, Scott Helms,, Brian Burton,, Chris Huang,, Ying Zhong,, Xuesong Gu,, Hong Fang,, Weida Tong,

Journal:

Gene Regulation and Systems Biology

Year:

2011

Language:

english

File:

PDF, 723 KB

english, 2011

27

The expression, induction and pharmacological activity of CYP1A2 are post-transcriptionally regulated by microRNA hsa-miR-132-5p

Chen, Yinting, Zeng, Linjuan, Wang, Yong, Tolleson, William H., Knox, Bridgett, Chen, Si, Ren, Zhen, Guo, Lei, Mei, Nan, Qian, Feng, Huang, Kaihong, Liu, David, Tong, Weida, Yu, Dianke, Ning, Baitang

Journal:

Biochemical Pharmacology

Year:

2017

Language:

english

File:

PDF, 1.25 MB

english, 2017

28

In silico weight of evidence assessment of drug-induced liver injury in humans

Yang, Chihae, Rathman, James, Mostrag, Aleksandra, Thakkar, Shraddha, Tong, Weida, Vitcheva, Vessela

Journal:

Toxicology Letters

Year:

2017

Language:

english

File:

PDF, 73 KB

english, 2017

29

[IEEE 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Kansas City, MO (2017.11.13-2017.11.16)] 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Comprehensive analysis of pulmonary adenocarcinoma in situ (AIS) revealed new insights into lung cancer progression

Li, Dan, Yang, William, Zhang, Yifan, Yang, Jack Y., Tong, Weida, Guan, Renchu, Yang, Mary Qu

Year:

2017

Language:

english

File:

PDF, 529 KB

english, 2017

30

Systemic similarity analysis of compatibility drug-induced multiple pathway patterns in vivo

Wang, Zhong, Zhang, Zhan-jun, Wang, Yi, Cheng, Yiyu, Tong, Weida, Wang, Yongyan

Journal:

Nature Precedings

Year:

2008

Language:

english

File:

PDF, 3.71 MB

english, 2008

31

Identification of translational microRNA biomarker candidates for ketoconazole-induced liver injury using next-generation sequencing

Li, Dongying, Knox, Bridgett, Gong, Binsheng, Chen, Si, Guo, Lei, Liu, Zhichao, Tong, Weida, Ning, Baitang

Journal:

Toxicological Sciences

Year:

2020

File:

PDF, 2.49 MB

2020

32

An integrated bioinformatics infrastructure essential for advancing pharmacogenomics and personalized medicine in the context of the FDA's Critical Path Initiative

Weida Tong, Stephen C. Harris, Hong Fang, Leming Shi, Roger Perkins, Federico Goodsaid, Felix W. Frueh

Journal:

Drug Discovery Today: Technologies

Year:

2007

Language:

english

File:

PDF, 1.20 MB

english, 2007

33

Genetic variation rs10484761 on 6p21.1 derived from a genome-wide association study is associated with gastric cancer survival in a Chinese population

Kang, Meiyun, Ding, Xiaojie, Xu, Ming, Zhu, Haixia, Liu, Sang, Wang, Meilin, Wu, Dongmei, Tong, Na, Gong, Weida, Zhou, Jianwei, Zhang, Zhengdong

Journal:

Year:

2014

Language:

english

File:

PDF, 590 KB

english, 2014

34

Homology modeling, molecular docking, and molecular dynamics simulations elucidated α-fetoprotein binding modes

Shen, Jie, Zhang, Wenqian, Fang, Hong, Perkins, Roger, Tong, Weida, Hong, Huixiao

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 2.09 MB

english, 2013

35

An Integrated Study of Acute Effects of Valproic Acid in the Liver Using Metabonomics, Proteomics, and Transcriptomics Platforms

Schnackenberg, Laura K., Jones, Richard C., Thyparambil, Sheeno, Taylor, Jason T., Han, Tao, Tong, Weida, Hansen, Deborah K., Fuscoe, James C., Edmondson, Ricky D., Beger, Richard D., Dragan, Yvonne P

Journal:

Omics A Journal of Integrative Biology

Year:

2006

Language:

english

File:

PDF, 267 KB

english, 2006

36

Comparing Next-Generation Sequencing and Microarray Technologies in a Toxicological Study of the Effects of Aristolochic Acid on Rat Kidneys

Su, Zhenqiang, Li, Zhiguang, Chen, Tao, Li, Quan-Zhen, Fang, Hong, Ding, Don, Ge, Weigong, Ning, Baitang, Hong, Huixiao, Perkins, Roger G., Tong, Weida, Shi, Leming

Journal:

Chemical Research in Toxicology

Year:

2011

Language:

english

File:

PDF, 2.02 MB

english, 2011

37

Multiclass Decision Forest—A Novel Pattern Recognition Method for Multiclass Classification in Microarray Data Analysis

Hong, Huixiao, Tong, Weida, Perkins, Roger, Fang, Hong, Xie, Qian, Shi, Leming

Journal:

DNA and Cell Biology

Year:

2004

Language:

english

File:

PDF, 1.26 MB

english, 2004

38

[IEEE 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Kansas City, MO (2017.11.13-2017.11.16)] 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Toward precision breast cancer survival prediction utilizing combined whole genome-wide expression and somatic mutation analysis

Zhang, Yifan, Yang, William, Li, Dan, Yang, Jack Y., Guan, Renchu, Tong, Weida, Yang, Mary Qu

Year:

2017

Language:

english

File:

PDF, 345 KB

english, 2017

39

Transcriptional Responses Reveal Similarities Between Preclinical Rat Liver Testing Systems

Liu, Zhichao, Delavan, Brian, Roberts, Ruth, Tong, Weida

Journal:

Frontiers in Genetics

Year:

2018

Language:

english

File:

PDF, 1.76 MB

english, 2018

40

Toward Clinical Implementation of Next-Generation Sequencing-Based Genetic Testing in Rare Diseases: Where Are We?

Liu, Zhichao, Zhu, Liyuan, Roberts, Ruth, Tong, Weida

Journal:

Trends in Genetics

Year:

2019

File:

PDF, 2.40 MB

2019

41

Maximizing biomarker discovery by minimizing gene signatures

Chang Chang, Junwei Wang, Chen Zhao, Jennifer Fostel, Weida Tong, Pierre R Bushel, Youping Deng, Lajos Pusztai, W Fraser Symmans, Tieliu Shi

Journal:

Year:

2011

Language:

english

File:

PDF, 705 KB

english, 2011

42

Modeling Chemical Interaction Profiles: II. Molecular Docking, Spectral Data-Activity Relationship, and Structure-Activity Relationship Models for Potent and Weak Inhibitors of Cytochrome P450 CYP3A4 Isozyme

Tie, Yunfeng, McPhail, Brooks, Hong, Huixiao, Pearce, Bruce A., Schnackenberg, Laura K., Ge, Weigong, Buzatu, Dan A., Wilkes, Jon G., Fuscoe, James C., Tong, Weida

Journal:

Year:

2012

Language:

english

File:

PDF, 1.18 MB

english, 2012

43

Rat α-Fetoprotein Binding Affinities of a Large Set of Structurally Diverse Chemicals Elucidated the Relationships between Structures and Binding Affinities

Hong, Huixiao, Branham, William S., Dial, Stacey L., Moland, Carrie L., Fang, Hong, Shen, Jie, Perkins, Roger, Sheehan, Daniel, Tong, Weida

Journal:

Chemical Research in Toxicology

Year:

2012

Language:

english

File:

PDF, 1.61 MB

english, 2012

44

Assessment of prediction confidence and domain extrapolation of two structure-activity relationship models for predicting estrogen receptor binding activity

Tong, Weida, Xie, Qian, Hong, Huixiao, Shi, Leming, Fang, Hong, Perkins, Roger

Journal:

Environmental Health Perspectives

Year:

2004

Language:

english

File:

PDF, 264 KB

english, 2004

45

Toward predictive models for drug-induced liver injury in humans: are we there yet?

Chen, Minjun, Bisgin, Halil, Tong, Lillian, Hong, Huixiao, Fang, Hong, Borlak, Jürgen, Tong, Weida

Journal:

Biomarkers in Medicine

Year:

2014

Language:

english

File:

PDF, 812 KB

english, 2014

46

Gaining Confidence on Molecular Classification through Consensus Modeling and Validation

Tong, Weida, Fang, Hong, Xie, Qian, Hong, Huixiao, Shi, Leming, Perkins, Roger, Scherf, Uwe, Goodsaid, Federico, Frueh, Felix

Journal:

Toxicology Mechanisms and Methods

Year:

2006

Language:

english

File:

PDF, 2.17 MB

english, 2006

47

Biomarkers for drug-induced liver injury

Shi, Qiang, Hong, Huixiao, Senior, John , Tong, Weida

Journal:

Expert Review of Gastroenterology and Hepatology

Year:

2010

Language:

english

File:

PDF, 280 KB

english, 2010

48

Classification of cDNA Array Genes That Have a Highly Significant Discriminative Power Due to Their Unique Distribution in Four Brain Regions

Fang, Hong, Tong, Weida, Shi, Leming, Jakab, Robert L., Bowyer, John F.

Journal:

DNA and Cell Biology

Year:

2004

Language:

english

File:

PDF, 1.94 MB

english, 2004

49

Discovery of Transcriptional Targets Regulated by Nuclear Receptors Using a Probabilistic Graphical Model

Lee, Mikyung, Huang, Ruili, Tong, Weida

Journal:

Toxicological Sciences

Year:

2016

Language:

english

File:

PDF, 731 KB

english, 2016

50

Inhibition of bile salt transport by drugs associated with liver injury in primary hepatocytes from human, monkey, dog, rat, and mouse

Zhang, Jie, He, Kan, Cai, Lining, Chen, Yu-Chuan, Yang, Yifan, Shi, Qin, Woolf, Thomas F., Ge, Weigong, Guo, Lei, Borlak, Jürgen, Tong, Weida

Journal:

Chemico-Biological Interactions

Year:

2016

Language:

english

File:

PDF, 1.08 MB

english, 2016

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